Next: Introduction

Analysis of Diffuse Scattering from Yeast Initiator tRNA Crystals

Anand R. Kolatkar, James B. Clarage and George N. Phillips, Jr.

Department of Biochemistry and Cell Biology and
W.M. Keck Center for Computational Biology
Rice University
PO Box 1892, Houston, TX. 77251-1892

Abstract:

Yeast initiator tRNA crystals exhibit strong X-ray diffuse scattering. This scattering can be used to extract information about lattice-coupled and intramolecular motions in the crystals. The amplitudes and correlation distances of these motions can be estimated by calculating the diffuse scattering and comparing the results to the observed scattering. Results indicate that both anisotropic, lattice-coupled motions as well as short-range correlated local disorder in the anti-codon arm contribute to the overall disorder in the crystals. These types of motions can be correlated with aspects of tRNA function. This additional information complements the results from analysis of crystallographic data and provides a more detailed picture of the structure and dynamics of the molecule.